ProGP1283 (50S ribosomal protein L43e)

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ProGP ID ProGP1283 (50S ribosomal protein L43e)
Validation Status Uncharacterized
Organism Information
Organism NameHaloferax volcanii DS2
Domain Archaea
Classification Phylum : Euryarchaeota
Class : Halobacteria
Orders : Haloferacales
Family : Haloferacaceae
Genus : Haloferax
Species : volcanii
Strain : DS2
Taxonomic ID (NCBI) 2246
Genome Information
GenBank M62816
EMBL M62816
Organism Additional Information It is an easily culturable moderate halophile
Gene Information
Gene NameHVO_0654
Protein Information
Protein Name50S ribosomal protein L43e
UniProtKB/SwissProt ID D4GSR4
UniProtKB Sequence >tr|D4GSR4|D4GSR4_HALVD 50S ribosomal protein L43e OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) OX=309800 GN=rpl43e PE=3 SV=1 MADKKARSVGSSGRFGARYGRVARRRVKEIEAEMRNSKVDGDDVTRVETGVWKNEETGEIFTGGTYRPQTPAGKQVRRSIRAALTGEDE
Subcellular Locationcytosolic
Glycosylation Status
Glycosylation Type O- (Ser/Thr) linked
Technique(s) used for Glycosylation DetectionUPLC coupled via a nanospray source to a Q-Exactive HFX tandem MS
Glycan Information
Technique(s) used for Glycan Identification UPLC coupled via a nanospray source to a Q-Exactive HFX tandem MS
Protein Glycosylation linked (PGL) gene(s)
Additional CommentGlycosylation is predicted by glycoproteomic in-silico analysis of raw experimental data available on PRIDE and jPOST.
Year of Identification2021
ReferenceSchulze, S., Pfeiffer, F., Garcia, B.A. and Pohlschroder, M., 2021. Comprehensive glycoproteomics shines new light on the complexity and extent of glycosylation in archaea. PLoS biology, 19(6), p.e3001277.
Corresponding Author Mechthild Pohlschroder
ContactDepartment of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America